Books

B1

 "Model Order Reduction - Volume 1,  System and Data-Driven Methods and Algorithms",  Peter Benner, Stefano Grivet-Talocia, Alfio Quarteroni, Gianluigi Rozza, Wil Schilders, L. Miguel Silveira, (editors), De Gruyter, November 2021

URL: https://www.degruyter.com/document/doi/10.1515/9783110498967/html

B2

"Model Order Reduction - Volume 2: Snapshot-Based Methods and Algorithms", Peter Benner, Stefano Grivet-Talocia, Alfio Quarteroni, Gianluigi Rozza, Wil Schilders, L. Miguel Silveira, (editors), De Gruyter, December 2020

URL: https://www.degruyter.com/document/doi/10.1515/9783110671490/html

B3

"Model Order Reduction - Volume 3: Applications", Peter Benner, Stefano Grivet-Talocia, Alfio Quarteroni, Gianluigi Rozza, Wil Schilders, L. Miguel Silveira, (editors), De Gruyter, December 2020

URL: https://www.degruyter.com/document/doi/10.1515/9783110499001/html

 

Journal papers

J1

Ruxandra Barbulescu, Gonçalo Mestre, Arlindo Oliveira and Luis Miguel Silveira, ''Learning the dynamics of realistic models of C. elegans nervous system with recurrent neural networks'', article in Scientific Reports 13(467), Jan. 2023, Nature.

URL: https://www.nature.com/articles/s41598-022-25421-w

J2

Gonçalo Mestre, Ruxandra Barbulescu, Arlindo L. Oliveira and L. Miguel Silveira, "Modelling Neuronal Behaviour with Time Series Regression: Recurrent Neural Networks on C. Elegans Data", Arxiv preprint hep-th, 2021.

URL = https://arxiv.org/abs/2107.06762

J3

Gabriela Ciuprina, Daniel Ioan, Aurel-Sorin Lup, Luis Miguel Silveira, Anton Duca and Michael Kraft. ”Simplification by pruning as a model order reduction approach for RF-MEMS switches”, COMPEL- The international journal for computation and mathematics in electrical and electronic engineering 39(2), pp. 511–523, Nov. 2019, Emerald Publishing Limited.

URL: http://algos.inesc-id.pt/projects/neuronreduce/publications/J2-Ciuprina_et_al-COMPELnov2019.pdf

J4

Daniel Ioan, Ruxandra Barbulescu, Luis Miguel Silveira and Gabriela Ciuprina, ”Reduced Order Models of Myelinated Ax- 10 onal Compartments”, Journal of Computational Neuroscience (47) pp. 141- 166. Oct. 2019, Springer.

URL: https://link.springer.com/article/10.1007/s10827-019-00726-4

J5

Ruxandra Barbulescu, Daniel Ioan and Gabriela Ciuprina, ”Coupled Macromodels for the Simulation of the Saltatory Con- duction”, UPB Scientific Bulletin, Series C: Electrical Engineering 81(3), 2019.

URL: https://www.scientificbulletin.upb.ro/rev_docs_arhiva/rez44a_317049.pdf

 

 

 

 

 


 

 

 

 

 

 

 

 

Book Chapters

BC1

Stefano Grivet-Talocia and L. Miguel Silveira, "Post-processing methods for passivity enforcement". In ""Model Order Reduction Volume 1 System and Data-Driven Methods and Algorithms", Peter Benner, Stefano Grivet-Talocia, Alfio Quarteroni, Gianluigi Rozza, Wil Schilders, L. Miguel Silveira, (editors), De Gruyter, November 2021

URL: https://www.degruyter.com/document/doi/10.1515/9783110498967/html

BC2

Ruxandra Barbulescu, Gabriela Ciuprina, Tudor Ionescu, Daniel Ioan and Luis Miguel Silveira, ''Efficient model reduction of myelinated compartments as port-Hamiltonian systems''. In: van Beurden M., Budko N., Schilders W. (eds) Scientific Computing in Electrical Engineering. Mathematics in Industry (36), pp.3-12. Springer, 2021.

URL: https://link.springer.com/chapter/10.1007/978-3-030-84238-3_1

BC3

Peter Benner, Stefano Grivet-Talocia, Alfio Quarteroni, Gianluigi Rozza, Wil Schilders and Luis Miguel Silveira. ”Model Order Re- duction: Basic Concepts and Notation.” In Model Order Reduction: Volume 1: System-and Data-Driven Methods and Algorithms, pp. 1-14. De Gruyter, November 2021.

URL: https://www.degruyter.com/document/doi/10.1515/9783110498967/html

 

Papers, Preprints and extended abstracts in conference proceedings:

C1

Ruxandra Barbulescu, Arlindo L. Oliveira and L. Miguel Silveira, "Physics-informed machine learning for reliable predictions of the behavioural dynamics of C. elegans", 2022 Bernstein Conference, September 2022.

C2

Ruxandra Barbulescu, Gonçalo Mestre, Arlindo Oliveira and Luis Miguel Silveira, ''Modelling the dynamic behaviour of the C. elegans nervous system with machine learning techniques'', 6th HBP Student Conference on Interdisciplinary Brain Research, February 2022, DOI: 10.3389/978-2-88971-014-0, pp. 51-55.

URL: https://sos-ch-dk-2.exo.io/public-website-production-2022/filer_public/b1/be/b1be0a50-77bc-4aba-a581-8d2235c2950b/proceedings_hbpsc2022.pdf

C3

Ruxandra-Georgeta Barbulescu, Gonçalo Leote Mestre, Arlindo L. Oliveira, L. Miguel Silveira, "Using Recurrent Neural Networks to model the dynamic behaviour of the C. Elegans nervous system", Champalimaud Research Symposium 2021, October 2021.

URL: http://algos.inesc-id.pt/projects/neuronreduce/publications/C4-Barbulescu_et_al-CRS2021.pdf

C4

Ruxandra-Georgeta Barbulescu, L. Miguel Silveira, "Black-box model reduction of the C. Elegans nervous system",  43rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), October 2021.

URL: https://ieeexplore.ieee.org/document/9630241

C5

Gonçalo Mestre, Ruxandra Barbulescu, Arlindo L. Oliveira, L. Miguel Silveira, "Modelling Neuronal Behaviour with Time Series Regression: Recurrent Neural Networks on C. Elegans Data", arXiv preprint arXiv:2107.06762v1.

URL: https://arxiv.org/pdf/2107.06762.pdf

C6

Ruxandra-Georgeta Barbulescu, L. Miguel Silveira, "Model order reduction of the C. elegans nervous system with POD-DEIM", 2021 Bernstein Conference, September 2021.

URL: http://algos.inesc-id.pt/projects/neuronreduce/publications/C2-Barbulescu_Silveira-Bernstein2021.pdf

C7

Ruxandra Barbulescu, Gabriela Ciuprina, Tudor Ionescu, Daniel Ioan and L. Miguel Silveira, "Efficient model reduction of myelinated axons as port-Hamiltonean systems", presented at the 2020 International Conference on Scientific Computing in Electrical Engineering, Feb. 2020, Eindhoven, The Netherlands.

URL: http://algos.inesc-id.pt/projects/neuronreduce/publications/C1-Barbulescu_et_all-SCEE2020.pdf


MSc Theses

T1 Gonçalo Leote Cardoso Mestre, "Modeling Large Neuron Systems using Machine Learning Techniques", MSc. Thesis, Engineering and Data Science, IST - Instituto Superior Técnico, October 2021.